Package: NADA2 2.0.1

NADA2: Data Analysis for Censored Environmental Data

Contains methods described by Dennis Helsel in his book "Statistics for Censored Environmental Data using Minitab and R" (2011) and courses and videos at <https://practicalstats.com>. This package incorporates functions of NADA and adds new functionality.

Authors:Paul Julian [aut, cre], Dennis Helsel [aut, cph], Lopaka Lee [aut, cph]

NADA2_2.0.1.tar.gz
NADA2_2.0.1.zip(r-4.7)NADA2_2.0.1.zip(r-4.6)NADA2_2.0.1.zip(r-4.5)
NADA2_2.0.1.tgz(r-4.6-any)NADA2_2.0.1.tgz(r-4.5-any)
NADA2_2.0.1.tar.gz(r-4.7-any)NADA2_2.0.1.tar.gz(r-4.6-any)
NADA2_2.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
NADA2/json (API)

# Install 'NADA2' in R:
install.packages('NADA2', repos = c('https://swampthingpaul.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/swampthingpaul/nada2/issues

Datasets:

On CRAN:

Conda:

5.79 score 22 stars 27 scripts 524 downloads 60 exports 108 dependencies

Last updated from:6554db1e9a. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE207
source / vignettesOK217
linux-release-x86_64NOTE208
macos-release-arm64NOTE146
macos-oldrel-arm64NOTE212
windows-develNOTE166
windows-releaseNOTE141
windows-oldrelNOTE139
wasm-releaseOK141

Exports:anosimPlotATSATSminibestaicbinaryClustbinaryDissbinaryMDSbinarySimcboxplotcen_ecdfcen_pairedcen_signedranktestcen_signtestcen1waycen2meanscen2waycenanovacenboxplotcenCompareCdfscenCompareQQcencorregcenkencenperm2cenpermanovacenPredIntcenQQcenregQQcenroscenseakencenstatscensummarycensummary.defaultcensummary.factorcensummary.numericcenTolIntcentrendcentrendseacenxyplotcfitcomputeSEMequivalent_nkenplotMaclistMacmatMLEintvlNADAListNADAprobsordrankspartplotsppw.testrescaleProsROSciuMDSUscUsciuscoreuscoresuscoresi

Dependencies:abindbackportsbootbroomcarcarDatacenGAMcliclustercodetoolscoincolorspacecommonmarkcorrplotcowplotcpp11curlDerivdoBydplyrEnvStatsexactRankTestsfarverfitdistrplusforecastFormulafracdiffgenericsggplot2ggpubrggrepelggsciggsignifggtextgluegridExtragridtextgtableisobandjpeglabelinglatticelibcoinlifecyclelitedownlme4lmtestmagrittrmarkdownMASSMatrixMatrixModelsmatrixStatsmaxstatmgcvmicrobenchmarkminqamodelrmodeltoolsmultcompmvtnormNbClustnlmenloptrnnetnortestnumDerivpbkrtestpermpermutepillarpkgconfigpngpolynompurrrquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasrlangrstatixS7sandwichscalesSparseMstringistringrsurvivalsurvminerTH.datatibbletidyrtidyselecttimeDateurcautf8vctrsveganviridisLitewithrxfunxml2zoo

Readme and manuals

Help Manual

Help pageTopics
Permutation Analysis of Similarity (anosim) for Censored DataanosimPlot
Atrazine concentrations in Nebraska ground wateratrazine
Akritas-Theil-Sen line for censored dataATS
Kendall's tau and ATS line for censored dataATSmini
Find the lowest AIC multiple regression modelbestaic
Cluster Matrix of Binary Censored DatabinaryClust
Binary dissimilarity coefficient matrixbinaryDiss
Plot Nonmetric Multidimensional Scaling of binary censored databinaryMDS
Binary similarity coefficient matrixbinarySim
BrumbaughBrumbaugh
CadmiumCadmium
Draws censored boxplotscboxplot
Censored Empirical Cumulative Distribution Functioncen_ecdf
Censored data paired t-testcen_paired
Wilcoxcon Signed-Rank test for censored datacen_signedranktest
Sign test for censored datacen_signtest
Peto-Peto one-factor testcen1way
Censored data two-group test for difference in meanscen2means
Parametric Two Factor Fixed Effects ANOVA for censored datacen2way
ANOVA for censored datacenanova
Produces a censored boxplotcenboxplot
Comparison of empirical cdf of censored datacenCompareCdfs
Censored Q-Q Plot comparisoncenCompareQQ
Correlation and Regression with censored datacencorreg
Compute Kendall's Tau Correlation and ATS Line for Censored Datacenken
Censored two-group permutation testcenperm2
Censored data one-factor permutation testcenpermanova
Prediction interval for censored datacenPredInt
Q-Q Plot censored datacenQQ
Q-Q plot of censored regression residualscenregQQ
Seasonal Kendall permutation test on censored datacenseaken
Summary Statistics for Censored Data using ROS, MLE, and K-Mcenstats
Summary Statistics for Censored Datacensummary censummary.default censummary.factor censummary.numeric
Upper Tolerance interval for censored datacenTolInt
Trend analysis of censored data with a covariatecentrend
Trend analysis of censored data with a covariate and seasonal blockscentrendsea
Produces a censored x-y scatter plotcenxyplot
Compute an ECDF and Distribution Parameters for Censored Datacfit
Kendall's S-statistic for permutations of censored datacomputeS
CuZnCuZn
EM Algorithm for Interval-Censored DataEM
Censored data sample sizeequivalent_n
Example1Example1
Example2Example2
Example3Example3
Gales_CreekGales_Creek
Plot robust median ATS line for censored datakenplot
MarkersMarkers markers
NADA List ClassNADAList
Default Probability Values for Quantile EstimationNADAprobs
Computes ranks of data with one or multiple detection limitsordranks
Partial plots for censored MLE regressionpartplots
PbHeronPbHeron
Thiamethoxam concentrations in pollenPollen_Thia
Test for difference in left-censored samplesppw.test
Show Method for NADAList Objectsprint.NADAList
ReconLogisticReconLogistic
Rescale probability vectorrescaleP
Regression on Order Statistics (ROS)cenros plot.ros ros
Computes confidence intervals on regression on order statistics (ROS) meanROSci
ShePyreneShePyrene
TCE2TCE2
TCE Ground Waters of Long Island — with Explanatory VariablesTCEReg
Plot U-score Nonmetric Multidimensional Scaling of censored datauMDS
U-scores for (non-interval, sinle-column) Censored DataUsc
Interval-censored U-ScoreUsci
U-score (individual value)uscore
Uscores for multiple columns of censored datauscores
U-scores for interval-censored data (multiple columns)uscoresi